Pseudomonas aeruginosa LESB58, PALES_40041 (aphA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_40041
|
| Name |
aphA
|
| Replicon | chromosome |
| Genomic location | 4418619 - 4419659 (- strand) |
Cross-References
| RefSeq | YP_002441587 |
| GI | 218892718 |
| Entrez | 7178143 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
acetylpolyamine aminohydrolase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.27 |
| Kyte-Doolittle Hydrophobicity Value | -0.229 |
| Molecular Weight (kDa) | 37.9 |
| Isoelectric Point (pI) | 5.07 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 439 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001330 (480 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_40041
Search term: aphA
Search term: acetylpolyamine aminohydrolase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]
E-value:
1.2e-17
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]
E-value:
1.2e-17
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]
E-value:
1.2e-17
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]
E-value:
1.2e-17
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]
E-value:
1.2e-17
Percent Identity:
30.1
|
References
No references are associated with this feature.