Pseudomonas aeruginosa PAO1, PA0022

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA0022
Name	Synonym: yrdC
Replicon	chromosome
Genomic location	24001 - 24558 (+ strand)

Cross-References

RefSeq	NP_248712.1
GI	15595220
Affymetrix	PA0022_at
DNASU	PaCD00006013
Entrez	880711
GenBank	AAG03412.1
INSDC	AAG03412.1
NCBI Locus Tag	PA0022
protein_id(GenBank)	gb|AAG03412.1|AE004441_13|gnl|PseudoCAP|PA0022
TIGR	NTL03PA00023
UniParc	UPI00000C4EEF
UniProtKB Acc	Q9I7A5
UniProtKB ID	TSAC_PSEAE
UniRef100	UniRef100_Q02V59
UniRef50	UniRef50_Q88RQ9
UniRef90	UniRef90_Q02V59

Product

Feature Type	CDS
Coding Frame	1
Product Name	conserved hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation	Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7)	-1.66
Kyte-Doolittle Hydrophobicity Value	-0.025
Molecular Weight (kDa)	20.4
Isoelectric Point (pI)	6.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000022 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA0022

Human Homologs

References