Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0745
|
Name |
dspI
Synonym: dispersion inducer |
Replicon | chromosome |
Genomic location | 812445 - 813263 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
Comment |
RefSeq | NP_249436.1 |
GI | 15595942 |
Affymetrix | PA0745_at |
Entrez | 878156 |
GenBank | AAG04134.1 |
INSDC | AAG04134.1 |
NCBI Locus Tag | PA0745 |
protein_id(GenBank) | gb|AAG04134.1|AE004509_9|gnl|PseudoCAP|PA0745 |
TIGR | NTL03PA00746 |
UniParc | UPI00000C5134 |
UniProtKB Acc | Q9I5I4 |
UniProtKB ID | Q9I5I4_PSEAE |
UniRef100 | UniRef100_W0YNS2 |
UniRef50 | UniRef50_A9ANK2 |
UniRef90 | UniRef90_W6RIF3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DspI
|
Synonyms |
probable enoyl-CoA hydratase/isomerase |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.94 |
Kyte-Doolittle Hydrophobicity Value | -0.216 |
Molecular Weight (kDa) | 29.9 |
Isoelectric Point (pI) | 6.37 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5WYD | ISOMERASE | 01/12/17 | Structural of Pseudomonas aeruginosa DspI | Pseudomonas aeruginosa PAO1 | 2.101 | X-RAY DIFFRACTION | 99.6 |
5WYB | ISOMERASE | 01/12/17 | Structure of Pseudomonas aeruginosa DspI | Pseudomonas aeruginosa PA14 | 2.25 | X-RAY DIFFRACTION | 99.6 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 508 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000719 (1171 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0745
Search term: dspI
Search term: DspI
|
Ensembl
110, assembly
GRCh38.p14
|
enoyl-CoA hydratase, short chain 1 [Source:HGNC Symbol;Acc:HGNC:3151]
E-value:
2.1e-28
Percent Identity:
33.6
|
Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis.
Liu L, Li T, Cheng XJ, Peng CT, Li CC, He LH, Ju SM, Wang NY, Ye TH, Lian M, Xiao QJ, Song YJ, Zhu YB, Yu LT, Wang ZL, Bao R
Sci Rep 2018 Mar 2;8(1):3928
PubMed ID: 29500457
|
Genome-wide identification of Pseudomonas aeruginosa virulence-related genes using a Caenorhabditis elegans infection model.
Feinbaum RL, Urbach JM, Liberati NT, Djonovic S, Adonizio A, Carvunis AR, Ausubel FM
PLoS Pathog 2012;8(7):e1002813
PubMed ID: 22911607
|