Pseudomonas aeruginosa PAO1, PA1514

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1514
Name
Synonym: ybbT
Replicon chromosome
Genomic location 1646537 - 1647046 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs
CommentBiochemical evidence for pathway, gene locus identified from annotation: 44% similar to ureidoglycollate hydrolase (DAL3) from Saccharomyces cerevisiae. Listed in NCBI as ureidoglycolate hydrolase.

Cross-References

RefSeq NP_250205.1
GI 15596711
Affymetrix PA1514_at
Entrez 879403
GenBank AAG04903.1
INSDC AAG04903.1
NCBI Locus Tag PA1514
protein_id(GenBank) gb|AAG04903.1|AE004580_3|gnl|PseudoCAP|PA1514
TIGR NTL03PA01515
UniParc UPI0000125896
UniProtKB Acc Q9I3J9
UniProtKB ID ALLA_PSEAE
UniRef100 UniRef100_B7UW34
UniRef50 UniRef50_A4VP33
UniRef90 UniRef90_A6V7Z0

Product

Feature Type CDS
Coding Frame 1
Product Name
ureidoglycolate hydrolaseYbbT
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.59
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 19.0
Isoelectric Point (pI) 5.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003843 (543 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1514

Human Homologs

References

Chromosomal location of genes participating in the degradation of purines in Pseudomonas aeruginosa.
Matsumoto H, Ohta S, Kobayashi R, Terawaki Y
Mol Gen Genet 1978 Nov 29;167(2):165-76
PubMed ID: 104142