Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3477
|
Name |
rhlR
|
Replicon | chromosome |
Genomic location | 3889925 - 3890650 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_252167.1 |
GI | 15598673 |
Affymetrix | PA3477_rhlR_at |
Entrez | 878968 |
GenBank | AAG06865.1 |
INSDC | AAA62130.1 |
NCBI Locus Tag | PA3477 |
protein_id(GenBank) | gb|AAG06865.1|AE004768_10|gnl|PseudoCAP|PA3477 |
TIGR | NTL03PA03477 |
UniParc | UPI000013387F |
UniProtKB Acc | P54292 |
UniProtKB ID | RHLR_PSEAE |
UniRef100 | UniRef100_P54292 |
UniRef50 | UniRef50_P54292 |
UniRef90 | UniRef90_P54292 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
transcriptional regulator RhlR
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 0.59 |
Kyte-Doolittle Hydrophobicity Value | -0.278 |
Molecular Weight (kDa) | 27.6 |
Isoelectric Point (pI) | 7.19 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
8DQ1 | TRANSCRIPTION/DNA | 07/18/22 | Quorum-sensing receptor RhlR bound to PqsE | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 4.1 | ELECTRON MICROSCOPY | 100.0 |
7R3J | TRANSCRIPTION | 02/07/22 | Nativ complex of PqsE and RhlR with the synthetic antagonist mBTL | Pseudomonas aeruginosa PAO1 | 3.06 | X-RAY DIFFRACTION | 100.0 |
7R3E | TRANSCRIPTION | 02/07/22 | Fusion construct of PqsE and RhlR in complex with the synthetic antagonist mBTL | Pseudomonas aeruginosa PAO1 | 3.46 | X-RAY DIFFRACTION | 100.0 |
8DQ0 | TRANSCRIPTION | 07/18/22 | Quorum-sensing receptor RhlR bound to PqsE | Pseudomonas aeruginosa | 3.74 | ELECTRON MICROSCOPY | 100.0 |
8B4A | SIGNALING PROTEIN | 09/20/22 | Nativ complex of PqsE and RhlR with autoinducer C4-HSL | Pseudomonas aeruginosa PAO1 | 3.06 | X-RAY DIFFRACTION | 100.0 |
Source 1 | |
Database | VFDB : VF0093 |
Category | N-(butanoyl)-L-homoserine lactone QS system |
Evidence |
|
Host Organism | |
Notes | |
Reference |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 188 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001096 (1439 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3477
Search term: rhlR
Search term: transcriptional regulator RhlR
|
Isolation and characterization of a regulatory gene affecting rhamnolipid biosurfactant synthesis in Pseudomonas aeruginosa.
Ochsner UA, Koch AK, Fiechter A, Reiser J
J Bacteriol 1994 Apr;176(7):2044-54
PubMed ID: 8144472
|