Pseudomonas aeruginosa PAO1, PA3872 (narI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3872
Name
narI
Replicon chromosome
Genomic location 4335276 - 4335959 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252561.1
GI 15599067
Affymetrix PA3872_narI_at
DNASU PaCD00007687
Entrez 878884
GenBank AAG07259.1
INSDC AAG07259.1
NCBI Locus Tag PA3872
protein_id(GenBank) gb|AAG07259.1|AE004804_7|gnl|PseudoCAP|PA3872
TIGR NTL03PA03872
UniParc UPI00000D4246
UniProtKB Acc G3XD18
UniProtKB ID G3XD18_PSEAE
UniRef100 UniRef100_G3XD18
UniRef50 UniRef50_Q0C1W8
UniRef90 UniRef90_A6V0N7

Product

Feature Type CDS
Coding Frame 1
Product Name
respiratory nitrate reductase gamma chain
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 12.84
Kyte-Doolittle Hydrophobicity Value 0.751
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 10.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 146 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001799 (373 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3872
Search term: narI

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Roles of the narJ and narI gene products in the expression of nitrate reductase in Escherichia coli.
Sodergren EJ, Hsu PY, DeMoss JA
J Biol Chem 1988 Nov 5;263(31):16156-62
PubMed ID: 3053688
A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map.
Aiba H, Baba T, Hayashi K, Inada T, Isono K, Itoh T, Kasai H, Kashimoto K, Kimura S, Kitakawa M, Kitagawa M, Makino K, Miki T, Mizobuchi K, Mori H, Mori T, Motomura K, Nakade S, Nakamura Y, Nashimoto H, Nishio Y, Oshima T, Saito N, Sampei G, Horiuchi T
DNA Res 1996 Dec 31;3(6):363-77
PubMed ID: 9097039