Pseudomonas aeruginosa PAO1, PA4307 (pctC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4307
Name
pctC
Replicon chromosome
Genomic location 4831372 - 4833270 (+ strand)
Transposon Mutants 9 transposon mutants in PAO1
Transposon Mutants in orthologs 5 transposon mutants in orthologs

Cross-References

RefSeq NP_252997.1
GI 15599503
Affymetrix PA4307_pctC_at
Entrez 881576
GenBank AAG07695.1
INSDC AAG07695.1
NCBI Locus Tag PA4307
protein_id(GenBank) gb|AAG07695.1|AE004847_2|gnl|PseudoCAP|PA4307
TIGR NTL03PA04308
UniParc UPI00000C5CAC
UniProtKB Acc Q9HW93
UniProtKB ID PCTC_PSEAE
UniRef100 UniRef100_Q9HW93
UniRef50 UniRef50_G3XD24
UniRef90 UniRef90_Q9HW93

Product

Feature Type CDS
Coding Frame 1
Product Name
chemotactic transducer PctC
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -24.40
Kyte-Doolittle Hydrophobicity Value -0.038
Molecular Weight (kDa) 68.3
Isoelectric Point (pI) 4.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5LTV SIGNALING PROTEIN 09/07/16 LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECPETOR PCTC IN COMPLEX WITH GABA Pseudomonas aeruginosa 2.31 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 415 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003908 (941 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4307
Search term: pctC

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Genetic identification of chemotactic transducers for amino acids in Pseudomonas aeruginosa.
Taguchi K, Fukutomi H, Kuroda A, Kato J, Ohtake H
Microbiology (Reading) 1997 Oct;143 ( Pt 10):3223-3229
PubMed ID: 9353923