Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4461
|
Name |
lptB
Synonym: yhbG |
Replicon | chromosome |
Genomic location | 4991919 - 4992644 (+ strand) |
RefSeq | NP_253151.1 |
GI | 15599657 |
Affymetrix | PA4461_at |
DNASU | PaCD00007935 |
Entrez | 881018 |
GenBank | AAG07849.1 |
INSDC | AAG07849.1 |
NCBI Locus Tag | PA4461 |
protein_id(GenBank) | gb|AAG07849.1|AE004860_5|gnl|PseudoCAP|PA4461 |
TIGR | NTL03PA04462 |
UniParc | UPI00000C5D20 |
UniProtKB Acc | Q9HVV6 |
UniProtKB ID | Q9HVV6_PSEAE |
UniRef100 | UniRef100_W0YWK0 |
UniRef50 | UniRef50_P45073 |
UniRef90 | UniRef90_A0A0B7D3U1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Lipopolysaccharide export system ATP-binding protein LptB
|
Synonyms |
probable ATP-binding component of ABC transporter |
Evidence for Translation |
Detected using LC-MS/MS (26.45 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.66 |
Kyte-Doolittle Hydrophobicity Value | -0.070 |
Molecular Weight (kDa) | 26.5 |
Isoelectric Point (pI) | 6.68 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5X5Y | MEMBRANE PROTEIN | 02/18/17 | A membrane protein complex | Pseudomonas aeruginosa PAO1 | 3.465 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004050 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4461
Search term: lptB
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value:
9.9e-22
Percent Identity:
29.4
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value:
9.9e-22
Percent Identity:
29.4
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value:
9.9e-22
Percent Identity:
29.4
|
The requirement of RpoN (sigma factor sigma54) in denitrification by Pseudomonas stutzeri is indirect and restricted to the reduction of nitrite and nitric oxide.
Härtig E, Zumft WG
Appl Environ Microbiol 1998 Aug;64(8):3092-5
PubMed ID: 9687481
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|
Characterization of lptA and lptB, two essential genes implicated in lipopolysaccharide transport to the outer membrane of Escherichia coli.
Sperandeo P, Cescutti R, Villa R, Di Benedetto C, Candia D, Dehò G, Polissi A
J Bacteriol 2007 Jan;189(1):244-53
PubMed ID: 17056748
|