Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4496
|
Name |
dppA1
|
Replicon | chromosome |
Genomic location | 5031488 - 5033101 (+ strand) |
Transposon Mutants | 4 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 3 transposon mutants in orthologs |
Comment | Structural similarity to 1DPE (dipeptide binding protein from Escherichia coli, root-mean-square deviation: 0.5 angstroms). Sequence similarity to 1DPP (99%/53,06%) (G-L). Final predicted ligand: dipeptide (PMID: 31631799) |
RefSeq | NP_253186.1 |
GI | 15599692 |
Affymetrix | PA4496_at |
Entrez | 881067 |
GenBank | AAG07884.1 |
INSDC | AAG07884.1 |
NCBI Locus Tag | PA4496 |
protein_id(GenBank) | gb|AAG07884.1|AE004863_4|gnl|PseudoCAP|PA4496 |
TIGR | NTL03PA04497 |
UniParc | UPI00000C5D38 |
UniProtKB Acc | Q9HVS5 |
UniProtKB ID | Q9HVS5_PSEAE |
UniRef100 | UniRef100_W0Z289 |
UniRef50 | UniRef50_Q4KIC0 |
UniRef90 | UniRef90_V6ALT5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable binding protein component of ABC transporter
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | 2.06 |
Kyte-Doolittle Hydrophobicity Value | -0.465 |
Molecular Weight (kDa) | 60.1 |
Isoelectric Point (pI) | 7.62 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 559 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004084 (810 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4496
Search term: dppA1
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
High-throughput screening of dipeptide utilization mediated by the ABC transporter DppBCDF and its substrate-binding proteins DppA1-A5 in Pseudomonas aeruginosa.
Pletzer D, Lafon C, Braun Y, Köhler T, Page MG, Mourez M, Weingart H
PLoS One 2014;9(10):e111311
PubMed ID: 25338022
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|