Pseudomonas aeruginosa PAO1, PA4980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4980
Name
Replicon chromosome
Genomic location 5592633 - 5593424 (- strand)
Transposon Mutants 3 transposon mutants in PAO1

Cross-References

RefSeq NP_253667.1
GI 15600173
Affymetrix PA4980_at
Entrez 880426
GenBank AAG08365.1
INSDC AAG08365.1
NCBI Locus Tag PA4980
protein_id(GenBank) gb|AAG08365.1|AE004910_12|gnl|PseudoCAP|PA4980
TIGR NTL03PA04981
UniParc UPI00000C5EA9
UniProtKB Acc Q9HUI5
UniProtKB ID Q9HUI5_PSEAE
UniRef100 UniRef100_Q9HUI5
UniRef50 UniRef50_Q4KD65
UniRef90 UniRef90_A0A022NMY8

Product

Feature Type CDS
Coding Frame 1
Product Name
probable enoyl-CoA hydratase/isomerase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -2.98
Kyte-Doolittle Hydrophobicity Value 0.039
Molecular Weight (kDa) 27.7
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5YLO HYDROLASE 10/18/17 Structural of Pseudomonas aeruginosa PA4980 Pseudomonas aeruginosa PAO1 2.39 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 495 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003927 (823 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4980

Human Homologs

Ensembl 110, assembly GRCh38.p14
AU RNA binding methylglutaconyl-CoA hydratase [Source:HGNC Symbol;Acc:HGNC:890]
E-value: 2.4e-21
Percent Identity: 31.8

References

No references are associated with this feature.