Pseudomonas aeruginosa PAO1, PA4984

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4984
Name
Replicon chromosome
Genomic location 5599160 - 5599807 (- strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 19 transposon mutants in orthologs

Cross-References

RefSeq NP_253671.1
GI 15600177
Affymetrix PA4984_at
DNASU PaCD00008153
Entrez 880153
GenBank AAG08369.1
INSDC AAG08369.1
NCBI Locus Tag PA4984
protein_id(GenBank) gb|AAG08369.1|AE004911_4|gnl|PseudoCAP|PA4984
TIGR NTL03PA04985
UniParc UPI00000C5EAD
UniProtKB Acc Q9HUI1
UniProtKB ID Q9HUI1_PSEAE
UniRef100 UniRef100_W0Z2B2
UniRef50 UniRef50_Q4KD70
UniRef90 UniRef90_A6VDA2

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -3.68
Kyte-Doolittle Hydrophobicity Value 0.056
Molecular Weight (kDa) 23.4
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3E7Q transcription regulator 08/18/08 The crystal structure of the putative transcriptional regulator from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa 2.2 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4984

Human Homologs

References

No references are associated with this feature.