Pseudomonas aeruginosa PAO1, PA5227

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5227
Name
Synonym: ygfE
Replicon chromosome
Genomic location 5883972 - 5884286 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253914.1
GI 15600420
Affymetrix PA5227_at
DNASU PaCD00008250
Entrez 878641
GenBank AAG08612.1
INSDC AAG08612.1
NCBI Locus Tag PA5227
protein_id(GenBank) gb|AAG08612.1|AE004935_9|gnl|PseudoCAP|PA5227
TIGR NTL03PA05228
UniParc UPI00000C5F64
UniProtKB Acc Q9HTW3
UniProtKB ID ZAPA_PSEAE
UniRef100 UniRef100_Q9HTW3
UniRef50 UniRef50_Q9HTW3
UniRef90 UniRef90_Q9HTW3

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -2.59
Kyte-Doolittle Hydrophobicity Value -0.628
Molecular Weight (kDa) 11.7
Isoelectric Point (pI) 5.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1W2E BACTERIAL CELL DIVISION 07/01/04 The Crystal Structure of the Bacterial Cell Division Protein ZapA PSEUDOMONAS AERUGINOSA 2.8 X-RAY DIFFRACTION 100.0
1T3U STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04/27/04 Unknown conserved bacterial protein from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa PAO1 2.5 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004808 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5227

Human Homologs

References

No references are associated with this feature.