Motif View

Internal ID 1571916
Source Database CollecTF A cross-reference and link to the record at CollecTF is not available yet. (CollecTF website)
Feature Type motif
Name
PsrA binding site
Sequence CAAACGCCTGTTTG
Look for more occurrences
Start 564778
End 564791
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000314
direct assay evidence used in manual assertion
ChIP-Seq,ChIP-PCR,RNA-Seq,qPCR [quantitative real-time]
Additional Comments

Reference

Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response.
Balasubramanian D, Kumari H, Jaric M, Fernandez M, Turner KH, Dove SL, Narasimhan G, Lory S, Mathee K
Nucleic Acids Res 2014 Jan;42(2):979-98
PubMed ID: 24157832