Motif View

Internal ID 17653630
Source Database TransTermHP TERM 3
Feature Type terminator
Name
Rho-independent transcription terminator TERM 3
Sequence CGGCCGGCATTTCGCCGGCCG
Look for more occurrences
Start 23186
End 23206
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCACGTTATCCCG(5' tail) CGGCCGGC(5' stem) ATTTC(loop) GCCGGCCG(3' stem) TTTTCGTTGTAGCGC(3' tail). Confidence: 100. overlap 23181 23198

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685