Motif View

Internal ID 17657025
Source Database TransTermHP TERM 706
Feature Type terminator
Name
Rho-independent transcription terminator TERM 706
Sequence AAGCCCCGGCCTTGCCGGGGCTA
Look for more occurrences
Start 2864546
End 2864568
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACGTCAGCATTGAA(5' tail) AAGCCCCGGC(5' stem) CTT(loop) GCCGGGGCTA(3' stem) TTTATTTCACTCTGC(3' tail). Confidence: 100. opp_overlap 2864548, overlap 2864548

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685