Motif View

Internal ID 17657026
Source Database TransTermHP TERM 707
Feature Type terminator
Name
Rho-independent transcription terminator TERM 707
Sequence GCCCCGGCCTTGCCGGGGC
Look for more occurrences
Start 2864548
End 2864566
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTCAGCATTGAAAA(5' tail) GCCCCGGC(5' stem) CTT(loop) GCCGGGGC(3' stem) TATTTATTTCACTCT(3' tail). Confidence: 100. opp_overlap 2864548, overlap 2864546

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685