Motif View

Internal ID 17659857
Source Database TransTermHP TERM 766
Feature Type terminator
Name
Rho-independent transcription terminator TERM 766
Sequence GGGCCCGGACTGACCGGGCCC
Look for more occurrences
Start 3299885
End 3299905
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAACTCACTGCGAAT(5' tail) GGGCCCGG(5' stem) ACTGA(loop) CCGGGCCC(3' stem) TTTCGGACACTCAGC(3' tail). Confidence: 95. opp_overlap 3299877 3299873

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685