| Internal ID | 17661104 | Source Database | TransTermHP TERM 1230 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1230
|
| Sequence |
TGGAGAACCTCTTGCAGGCCACGGGGGGCGTGGCTTGCGAGGTGTTGTGTG Look for more occurrences |
| Start | 5370939 |
| End | 5370989 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGGCTGATCAAAAAA(5' tail) CACACAACACCTCGCAAGCCACG(5' stem) CCCCC(loop) CGTGGCCTGCAAGAGGTTCTCCA(3' stem) AGGGTTATCCACAGG(3' tail). Confidence: 90. opp_overlap 5370948 5370948, overlap 5370941 5370946 5370948 5370949 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|