Internal ID | 17661105 | Source Database | TransTermHP TERM 1232 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1232
|
Sequence |
CCTCTTGCAGGCCACGGGGGGCGTGGCTTGCGAGGTG Look for more occurrences |
Start | 5370946 |
End | 5370982 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | TCAAAAAACACACAA(5' tail) CACCTCGCAAGCCACG(5' stem) CCCCC(loop) CGTGGCCTGCAAGAGG(3' stem) TTCTCCAAGGGTTAT(3' tail). Confidence: 93. opp_overlap 5370948 5370948, overlap 5370941 5370939 5370948 5370949 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|