Motif View

Internal ID 17661348
Source Database TransTermHP TERM 190
Feature Type terminator
Name
Rho-independent transcription terminator TERM 190
Sequence GACCCGCTTTCGAGCGGGTC
Look for more occurrences
Start 812837
End 812856
Strand -
Genomic Context
Replicon Pseudomonas protegens Pf-5 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGGCGGCAAAAAAA(5' tail) GACCCGCT(5' stem) CGAA(loop) AGCGGGTC(3' stem) TCAGTCATCCGGATG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685