Motif View

Internal ID 17661349
Source Database TransTermHP TERM 191
Feature Type terminator
Name
Rho-independent transcription terminator TERM 191
Sequence GGCGAGAGATTCCCATGAGTCTCTCGCC
Look for more occurrences
Start 814660
End 814687
Strand -
Genomic Context
Replicon Pseudomonas protegens Pf-5 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGGATAAACAAAAA(5' tail) GGCGAGAGACTC(5' stem) ATGG(loop) GAATCTCTCGCC(3' stem) CTCAACCAAGCGTAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685