Motif View

Internal ID 17665215
Source Database TransTermHP TERM 420
Feature Type terminator
Name
Rho-independent transcription terminator TERM 420
Sequence TCGACCGACTCGCCGTGCGAGTCGGTCGG
Look for more occurrences
Start 1865751
End 1865779
Strand +
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCGCTGATCCTGGC(5' tail) TCGACCGACTCGC(5' stem) CGT(loop) GCGAGTCGGTCGG(3' stem) ATTGATTGCCTCACG(3' tail). Confidence: 100. overlap 1865750

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685