Motif View

Internal ID 17667967
Source Database TransTermHP TERM 57
Feature Type terminator
Name
Rho-independent transcription terminator TERM 57
Sequence GGGGCTGCACAGCAGCCCC
Look for more occurrences
Start 174528
End 174546
Strand -
Genomic Context
Replicon Pseudomonas putida GB-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACAGCTGAAAAAGAA(5' tail) GGGGCTGC(5' stem) TGT(loop) GCAGCCCC(3' stem) ATCGCGACACAAGGC(3' tail). Confidence: 100. overlap 174525

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685