| Internal ID | 17667968 | Source Database | TransTermHP TERM 58 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 58
|
| Sequence |
GGAAGCCCCGGTCAGAATCTGTCGGGGCTTTCC Look for more occurrences |
| Start | 176189 |
| End | 176221 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas putida GB-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TCCGGATCAATAAAA(5' tail) GGAAAGCCCCGA-CAG(5' stem) ATT(loop) CTGACCGGGGC-TTCC(3' stem) TTTATATCAGCTGGT(3' tail). Confidence: 100. opp_overlap 176190, overlap 176190 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|