Motif View

Internal ID 17668034
Source Database TransTermHP TERM 159
Feature Type terminator
Name
Rho-independent transcription terminator TERM 159
Sequence GGGGCCGCAATGCGGCCCC
Look for more occurrences
Start 447583
End 447601
Strand +
Genomic Context
Replicon Pseudomonas putida GB-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTAGAGATGTAAAAA(5' tail) GGGGCCGC(5' stem) AAT(loop) GCGGCCCC(3' stem) TTGTGGTTTACAGCC(3' tail). Confidence: 100. opp_overlap 447583

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685