Motif View

Internal ID 17671852
Source Database TransTermHP TERM 2
Feature Type terminator
Name
Rho-independent transcription terminator TERM 2
Sequence GCCAACGCTTATGCGTTGGC
Look for more occurrences
Start 6814
End 6833
Strand +
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGCTCCAAAAAAA(5' tail) GCCAACGC(5' stem) TTAT(loop) GCGTTGGC(3' stem) TTTTTTTTACATTTT(3' tail). Confidence: 100. opp_overlap 6814

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685