| Internal ID | 17675241 | Source Database | TransTermHP TERM 558 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 558
|
| Sequence |
CAGCCGGGGCCGCAATGCGGCCCCGGCTG Look for more occurrences |
| Start | 2438741 |
| End | 2438769 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas putida BIRD-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGACCGCTGTTGCTG(5' tail) CAGCCGGGGCCGC(5' stem) AAT(loop) GCGGCCCCGGCTG(3' stem) TTTTGGATCAAACCT(3' tail). Confidence: 100. opp_overlap 2438729 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|