Motif View

Internal ID 17675678
Source Database TransTermHP TERM 110
Feature Type terminator
Name
Rho-independent transcription terminator TERM 110
Sequence GGGCGGCCGGCACCCGTGCCGGCCGCCG
Look for more occurrences
Start 497647
End 497674
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTGAGCGGCGCGAC(5' tail) GGGCGGCCGGCA(5' stem) CCCG(loop) TGCCGGCCGCCG(3' stem) TGTTTCAGAACAGCC(3' tail). Confidence: 93. overlap 497646 497648

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685