Motif View

Internal ID 17675679
Source Database TransTermHP TERM 111
Feature Type terminator
Name
Rho-independent transcription terminator TERM 111
Sequence GGCGGCCGGCACCCGTGCCGGCCGCC
Look for more occurrences
Start 497648
End 497673
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGAGCGGCGCGACG(5' tail) GGCGGCCGGCA(5' stem) CCCG(loop) TGCCGGCCGCC(3' stem) GTGTTTCAGAACAGC(3' tail). Confidence: 100. overlap 497647 497646

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685