Motif View

Internal ID 17679449
Source Database TransTermHP TERM 910
Feature Type terminator
Name
Rho-independent transcription terminator TERM 910
Sequence GCCCCAGGCGCTCCACGGCGCCCGGGGC
Look for more occurrences
Start 4129509
End 4129536
Strand -
Genomic Context
Replicon Pseudomonas stutzeri CCUG 29243 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTCATGCTCGAAA(5' tail) GCCCCGGGCGCC(5' stem) GTGG(loop) AGCGCCTGGGGC(3' stem) TTCTGTCCTTTACCG(3' tail). Confidence: 90. opp_overlap 4129509

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685