Motif View

Internal ID 17679700
Source Database TransTermHP TERM 303
Feature Type terminator
Name
Rho-independent transcription terminator TERM 303
Sequence CGCCCCGCCATGCCGGGGCG
Look for more occurrences
Start 1450189
End 1450208
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAACTGCGACGGCAA(5' tail) CGCCCCG(5' stem) CCATGC(loop) CGGGGCG(3' stem) TTTCATTTCCCTTCA(3' tail). Confidence: 90. overlap 1450185

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685