Motif View

Internal ID 17679990
Source Database TransTermHP TERM 768
Feature Type terminator
Name
Rho-independent transcription terminator TERM 768
Sequence CCCCGCCTCGGCGGGG
Look for more occurrences
Start 3708093
End 3708108
Strand -
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCAGAAAAAGAAAA(5' tail) CCCCGC(5' stem) CGAG(loop) GCGGGG(3' stem) CTTTTGCAGACTGAA(3' tail). Confidence: 100. opp_overlap 3708093 3708092

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685