Motif View

Internal ID 17683010
Source Database TransTermHP TERM 394
Feature Type terminator
Name
Rho-independent transcription terminator TERM 394
Sequence GCCCCTGCCGCGGATACGGCAGGGGC
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Start 1676775
End 1676800
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa B136-33, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCAGGCGAAGAAA(5' tail) GCCCCTGCCG(5' stem) TATCCG(loop) CGGCAGGGGC(3' stem) TTTCTGCTTTCCGGC(3' tail). Confidence: 100. opp_overlap 1676771 1676768 1676775

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685