Motif View

Internal ID 17684801
Source Database TransTermHP TERM 70
Feature Type terminator
Name
Rho-independent transcription terminator TERM 70
Sequence TGAAAAAGCCCGCTTCGAGCGGGCTTTTTCG
Look for more occurrences
Start 357194
End 357224
Strand +
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGATCGGTCCTGATA(5' tail) TGAAAAAGCCCGCT(5' stem) TCG(loop) AGCGGGCTTTTTCG(3' stem) TTTGTGCCTGACCTC(3' tail). Confidence: 100. opp_overlap 357201, overlap 357195 357201

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685