Motif View

Internal ID 17684802
Source Database TransTermHP TERM 71
Feature Type terminator
Name
Rho-independent transcription terminator TERM 71
Sequence GAAAAAGCCCGCTTCGAGCGGGCTTTTTC
Look for more occurrences
Start 357195
End 357223
Strand +
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GATCGGTCCTGATAT(5' tail) GAAAAAGCCCGCT(5' stem) TCG(loop) AGCGGGCTTTTTC(3' stem) GTTTGTGCCTGACCT(3' tail). Confidence: 100. opp_overlap 357201, overlap 357194 357201

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685