Motif View

Internal ID 17684812
Source Database TransTermHP TERM 83
Feature Type terminator
Name
Rho-independent transcription terminator TERM 83
Sequence CCCCGCTTCGGCGGGG
Look for more occurrences
Start 457298
End 457313
Strand +
Genomic Context Located within gene [Psest_0420]
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATTCAGTCTGCAGAG(5' tail) CCCCGC(5' stem) TTCG(loop) GCGGGG(3' stem) TTTTTCTTTTCTGCT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685