Motif View

Internal ID 17685161
Source Database TransTermHP TERM 626
Feature Type terminator
Name
Rho-independent transcription terminator TERM 626
Sequence CAGCCGGGCCTCGCGCCCGGCTG
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Start 3050393
End 3050415
Strand -
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGACTCTAAACAAAA(5' tail) CAGCCGGGC(5' stem) GCGAG(loop) GCCCGGCTG(3' stem) GATCACCACCTCAGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685