Motif View

Internal ID 17685169
Source Database TransTermHP TERM 636
Feature Type terminator
Name
Rho-independent transcription terminator TERM 636
Sequence GGCCCGCATAGCTGCGGGCC
Look for more occurrences
Start 3090738
End 3090757
Strand +
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGAAACAAAAAA(5' tail) GGCCCGCA(5' stem) TAGC(loop) TGCGGGCC(3' stem) TTTGATTTCATTGGT(3' tail). Confidence: 100. opp_overlap 3090738

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685