Motif View

Internal ID 17685170
Source Database TransTermHP TERM 637
Feature Type terminator
Name
Rho-independent transcription terminator TERM 637
Sequence GGGTTAGCTTCGGCTAGCCC
Look for more occurrences
Start 3098957
End 3098976
Strand -
Genomic Context
Replicon Pseudomonas stutzeri RCH2 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCCCAAAAACAAAA(5' tail) GGGCTAGC(5' stem) CGAA(loop) GCTAACCC(3' stem) TTTGATTTCATTGGT(3' tail). Confidence: 100. opp_overlap 3098957, overlap 3098940

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685