| Internal ID | 17687493 | Source Database | TransTermHP TERM 1498 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1498
|
| Sequence |
AAGAAAGCCGCGCAATGCGCGGCTTTCGC Look for more occurrences |
| Start | 6248791 |
| End | 6248819 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas protegens CHA0, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTGGGCCCACCAAAC(5' tail) AAGAAAGCCGCGC(5' stem) AAT(loop) GCGCGGCTTTCGC(3' stem) TTTTCTGAATCGTTC(3' tail). Confidence: 100. opp_overlap 6248793 6248797, overlap 6248792 6248793 6248797 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|