| Internal ID | 17687494 | Source Database | TransTermHP TERM 1499 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1499
|
| Sequence |
AGAAAGCCGCGCAATGCGCGGCTTTCG Look for more occurrences |
| Start | 6248792 |
| End | 6248818 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas protegens CHA0, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TGGGCCCACCAAACA(5' tail) AGAAAGCCGCGC(5' stem) AAT(loop) GCGCGGCTTTCG(3' stem) CTTTTCTGAATCGTT(3' tail). Confidence: 90. opp_overlap 6248793 6248797, overlap 6248791 6248793 6248797 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|