Motif View

Internal ID 17689642
Source Database TransTermHP TERM 1750
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1750
Sequence TGGCCCCGCCGGCAGCCGCCGGCGGGGCCA
Look for more occurrences
Start 5563185
End 5563214
Strand +
Genomic Context
Replicon Pseudomonas denitrificans ATCC 13867, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGATTCCAGGCCCC(5' tail) TGGCCCCGCCGGC(5' stem) AGCC(loop) GCCGGCGGGGCCA(3' stem) TTGATGAGAAGGTAT(3' tail). Confidence: 100. overlap 5563173 5563171

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685