Pseudomonas aeruginosa PA7

Strain Overview
Organism Name Pseudomonas aeruginosa PA7
Species Pseudomonas aeruginosa
Strain PA7
Description/Title Sample from Pseudomonas aeruginosa PA7
Annotated Genes 6369
Partial Genes
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Geographic Location
Location Name Argentina
Isolation Source non-respiratory clinical isolate

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 1195
trpE
126		 guaA
43		 acsA
87		 nuoD
53		 ppsA
107		 aroE
34		 mutL
37
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000017205.1
Assembly Status latest
Scaffolds 1
Contigs
Contig N50 6588339
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02603435
NCBI Taxonomy ID 381754
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa PA7 chromosome, complete genome.

Annotated Features

Feature Count
gene 6361
CDS 6286
tRNA 63
rRNA 12
pseudo 8

Subcellular Localization

Localization Count
Cytoplasmic 2709
Cytoplasmic Membrane 1339
Periplasmic 168
Outer Membrane 174
Extracellular 57
Unknown 1688
Unknown (This protein may have multiple localization sites) 152
Flagellar 16
Fimbrial 10

Replicons

Name Length GC
Pseudomonas aeruginosa PA7 chromosome, complete genome. 6588339 bp 66.4%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs