Pseudomonas fluorescens A506

Strain Overview
Organism Name Pseudomonas fluorescens A506 - Assembly GCF_000262325.2
Species Pseudomonas fluorescens
Strain A506
Description/Title Sample from Pseudomonas fluorescens A506
Annotated Genes 5495
Partial Genes
Host Information
Geographic Location
Location Name USA: California
Isolation Source pear tree leaf

MLST Data

Database Scheme Sequence Type Alleles
PubMLST pfluorescens 5
glnS
5		 nuoD
5		 glnS
5		 ileS
5		 glnS
5		 recA
5		 gyrB
5		 glnS
5		 rpoB
5		 rpoD
5
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000262325.2
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02604280
NCBI Taxonomy ID 1037911
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas fluorescens A506 chromosome, complete genome.
Pseudomonas fluorescens A506 plasmid pA506, complete sequence.

Annotated Features

Feature Count
gene 5495
CDS 5334
tRNA 69
pseudo 56
rRNA 19
ncRNA 15
tmRNA 2

Subcellular Localization

Localization Count
Cytoplasmic 2341
Cytoplasmic Membrane 1227
Periplasmic 167
Outer Membrane 147
Extracellular 56
Unknown 1281
Unknown (This protein may have multiple localization sites) 115
Flagellar 19
Fimbrial 9
T3SS 2

Replicons

Name Length GC
Pseudomonas fluorescens A506 chromosome, complete genome. 5962570 bp 60.0%
Replicon details
Pseudomonas fluorescens A506 plasmid pA506, complete sequence. 56977 bp 51.9%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs