Strain Overview | |
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Organism Name | Pseudomonas aeruginosa PAK - Assembly GCF_000568855.2 |
Species | Pseudomonas aeruginosa |
Strain | PAK |
Description/Title | Pseudomonas aeruginosa PAK genome sequence |
Annotated Genes | 5564 |
Partial Genes | 96 |
Host Information | |
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Host Species Taxonomic Name | Homo sapiens |
Host Species Common Name | human |
Host Species Taxonomy ID | 9606 |
Geographic Location |
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Sample Provider | |
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Name | Peter Jorth |
pjorth@gmail.com | |
Institution | University of Texas at Austin |
Date Collected |
Database | Scheme | Sequence Type | Alleles | |||||||
---|---|---|---|---|---|---|---|---|---|---|
PubMLST | paeruginosa | 693 |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | |
Contig N50 | |
Assembly Level | Complete Genome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN02483603 |
NCBI Taxonomy ID | 1009714 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Genome Browsers* | |
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Pseudomonas aeruginosa PAK chromosome, complete genome. |
Name | Length | GC | |
---|---|---|---|
Pseudomonas aeruginosa PAK chromosome, complete genome. | 6283316 bp | 66.3% |
Replicon details
|
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |