Pseudomonas aeruginosa MPAO1/P1

Strain Overview
Organism Name Pseudomonas aeruginosa MPAO1/P1
Species Pseudomonas aeruginosa
Strain MPAO1/P1
Description/Title Sample from Pseudomonas aeruginosa MPAO1/P1
Annotated Genes 5858
Partial Genes 166
Host Information
Geographic Location

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa -
mutL
3
nuoD
4
aroE
5
guaA
12
ppsA
1
acsA
~7
trpE
7
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds 140
Contigs 140
Contig N50 143328
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN02471696
NCBI Taxonomy ID 1131757
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 5857
CDS 5790
tRNA 63
rRNA 4
pseudo 1

Subcellular Localization

Localization Count
Cytoplasmic 2634
Cytoplasmic Membrane 1323
Periplasmic 170
Outer Membrane 170
Extracellular 80
Unknown 1265
Unknown (This protein may have multiple localization sites) 148
Flagellar 17
Fimbrial 5
T3SS 5

Replicons

140 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF