Pseudomonas aeruginosa PAO1, PA5090 (vgrG5)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5090
Name
vgrG5
Replicon chromosome
Genomic location 5729473 - 5731845 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 10 transposon mutants in orthologs

Cross-References

RefSeq NP_253777.1
GI 15600283
Affymetrix PA5090_at
Entrez 882228
GenBank AAG08475.1
INSDC AAG08475.1
NCBI Locus Tag PA5090
protein_id(GenBank) gb|AAG08475.1|AE004921_12|gnl|PseudoCAP|PA5090
TIGR NTL03PA05091
UniParc UPI00000C5EF7
UniProtKB Acc Q9HU93
UniProtKB ID Q9HU93_PSEAE
UniRef100 UniRef100_Q9HU93
UniRef50 UniRef50_Q9HYC3
UniRef90 UniRef90_Q9HU93

Product

Feature Type CDS
Coding Frame 1
Product Name
VgrG5
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -20.46
Kyte-Doolittle Hydrophobicity Value -0.567
Molecular Weight (kDa) 87.8
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 150 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5090
Search term: vgrG5
Search term: VgrG5

References

Rhs elements comprise three subfamilies which diverged prior to acquisition by Escherichia coli.
Wang YD, Zhao S, Hill CW
J. Bacteriol. 1998 Aug;180(16):4102-10
PubMed ID: 9696756
Type VI secretion system in Pseudomonas aeruginosa: secretion and multimerization of VgrG proteins.
Hachani A, Lossi NS, Hamilton A, Jones C, Bleves S, Albesa-Jové D, Filloux A
J. Biol. Chem. 2011 Apr;286(14):12317-27
PubMed ID: 21325275