Pseudomonas aeruginosa UCBPP-PA14, PA14_00925 (tssL1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_00925
Name
tssL1
Replicon chromosome
Genomic location 92696 - 94045 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)

Cross-References

RefSeq YP_788234.1
GI 116054405
Entrez 4384005
INSDC ABJ15641.1
NCBI Locus Tag PA14_00925
UniParc UPI00000C4F1F
UniProtKB Acc Q02V02
UniProtKB ID Q02V02_PSEAB
UniRef100 UniRef100_Q9I754
UniRef50 UniRef50_Q4K3P3
UniRef90 UniRef90_Q9I754

Product

Feature Type CDS
Coding Frame 1
Product Name
TssL1
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 3.33
Kyte-Doolittle Hydrophobicity Value -0.256
Molecular Weight (kDa) 49.0
Isoelectric Point (pI) 8.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4B62 MEMBRANE PROTEIN 08/08/12 The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa PSEUDOMONAS AERUGINOSA PAO1 1.45 X-RAY DIFFRACTION 99.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 392 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000077 (865 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_00925
Search term: tssL1
Search term: TssL1

References

RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999