Pseudomonas aeruginosa UCBPP-PA14, PA14_00925 (tssL1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_00925
Name
tssL1
Replicon chromosome
Genomic location 92696 - 94045 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_788234.1
GI 116054405
Entrez 4384005
INSDC ABJ15641.1
NCBI Locus Tag PA14_00925
UniParc UPI00000C4F1F
UniProtKB Acc Q02V02
UniProtKB ID Q02V02_PSEAB
UniRef100 UniRef100_Q9I754
UniRef50 UniRef50_Q4K3P3
UniRef90 UniRef90_Q9I754

Product

Feature Type CDS
Coding Frame 1
Product Name
TssL1
Product Name Confidence: Class 1
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)
Evidence for Translation
Charge (pH 7) 3.33
Kyte-Doolittle Hydrophobicity Value -0.256
Molecular Weight (kDa) 49.0
Isoelectric Point (pI) 8.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4B62 MEMBRANE PROTEIN 08/08/12 The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa PSEUDOMONAS AERUGINOSA PAO1 1.45 X-RAY DIFFRACTION 99.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 392 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000077 (865 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_00925
Search term: tssL1
Search term: TssL1

References

PubMed ID: 28673999