Pseudomonas aeruginosa UCBPP-PA14, PA14_01010 (hsiB1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_01010
Name
hsiB1
Synonym: tssB1
Replicon chromosome
Genomic location 98900 - 99418 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 6 transposon mutants in orthologs

Cross-References

RefSeq YP_788240.1
GI 116053803
Entrez 4383501
INSDC ABJ15039.1
NCBI Locus Tag PA14_01010
UniParc UPI00000C4F24
UniProtKB Acc Q02UZ6
UniProtKB ID Q02UZ6_PSEAB
UniRef100 UniRef100_W0YKW6
UniRef50 UniRef50_J2YIR2
UniRef90 UniRef90_J2YIR2

Product

Feature Type CDS
Coding Frame 1
Product Name
HsiB1
Product Name Confidence: Class 1
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)
Evidence for Translation
Charge (pH 7) -3.00
Kyte-Doolittle Hydrophobicity Value -0.251
Molecular Weight (kDa) 18.8
Isoelectric Point (pI) 4.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4UQZ PROTEIN TRANSPORT 06/25/14 Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes PSEUDOMONAS AERUGINOSA PAO1 1.599 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1276 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_01010
Search term: hsiB1
Search term: HsiB1

References

PubMed ID: 28673999