Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
Locus Tag |
PA14_34080
|
Name |
lip3
Synonym: tssJ3 |
Replicon | chromosome |
Genomic location | 3029917 - 3030393 (+ strand) |
Transposon Mutants | 1 transposon mutants in UCBPP-PA14 |
Comment | Hcp Secretion Island-III-encoded type VI secretion system (H3-T6SS) |
RefSeq | YP_790879.1 |
GI | 116050304 |
Entrez | 4385123 |
INSDC | ABJ11540.1 |
NCBI Locus Tag | PA14_34080 |
UniParc | UPI0000396ABB |
UniProtKB Acc | Q02MF7 |
UniProtKB ID | Q02MF7_PSEAB |
UniRef100 | UniRef100_W0YPW4 |
UniRef50 | UniRef50_G8QBI0 |
UniRef90 | UniRef90_Q9I1B5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Lip3
|
Synonyms |
hypothetical protein |
Evidence for Translation | |
Charge (pH 7) | 2.38 |
Kyte-Doolittle Hydrophobicity Value | -0.135 |
Molecular Weight (kDa) | 18.0 |
Isoelectric Point (pI) | 8.48 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | PseudoCAP |
Category | Hcp secretion island-3 encoded type VI secretion system (H3-T6SS) |
Evidence |
ECO:0000316
genetic interaction evidence used in manual assertion
|
Host Organism | Arabidopsis thaliana |
Notes | |
Infection model | Arabidopsis leaf infiltration model |
Reference | 19497948 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003156 (329 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_34080
Search term: lip3
Search term: Lip3
|
Quorum sensing differentially regulates Pseudomonas aeruginosa type VI secretion locus I and homologous loci II and III, which are required for pathogenesis.
Lesic B, Starkey M, He J, Hazan R, Rahme LG
Microbiology (Reading) 2009 Sep;155(Pt 9):2845-2855
PubMed ID: 19497948
|
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A
Proc Natl Acad Sci U S A 2017 Jul 18;114(29):7707-7712
PubMed ID: 28673999
|